edu.iastate.metnet.aracyc
Class ClassesDatReader

java.lang.Object
  edu.iastate.metnet.aracyc.AbstractAracycFileReader
      edu.iastate.metnet.aracyc.AttributeFileReader
          edu.iastate.metnet.aracyc.ClassesDatReader

All Implemented Interfaces:

IAracycFileReader

public class ClassesDatReader
extends AttributeFileReader

Field Summary

Fields inherited from class edu.iastate.metnet.aracyc.AttributeFileReader

logger, PARSE, SEARCH

Constructor Summary

ClassesDatReader()

Method Summary

ClassTree	getClassTree(java.lang.String filename) return the classtree of the parentid and childid of class
void	importAracyc2MetNET(java.lang.String[] args)
static void	main(java.lang.String[] args)
protected java.util.Map	parseFile(java.util.LinkedList lines) parse the file lines and turn into maps
void	test(java.lang.String[] args)

Methods inherited from class edu.iastate.metnet.aracyc.AttributeFileReader

read

Methods inherited from class edu.iastate.metnet.aracyc.AbstractAracycFileReader

getFileLines, getFileLines, print, read

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ClassesDatReader

public ClassesDatReader()

Method Detail

getClassTree

public ClassTree getClassTree(java.lang.String filename)

return the classtree of the parentid and childid of class

Parameters:

filename - the class file

Returns:

the tree, which contain the all information for each class type. the map for each element contain UNIQUEID=>[], TYPES=>[], and so on.

main

public static void main(java.lang.String[] args)

test

public void test(java.lang.String[] args)

importAracyc2MetNET

public void importAracyc2MetNET(java.lang.String[] args)

parseFile

protected java.util.Map parseFile(java.util.LinkedList lines)

Description copied from class: AttributeFileReader

parse the file lines and turn into maps

Overrides:

parseFile in class AttributeFileReader

Parameters:

lines - the line read from the file

Returns:

the map of data