edu.iastate.metnet.datamodel.db
Interface Gene

All Superinterfaces:

Entity

All Known Implementing Classes:

GeneImpl

public interface Gene
extends Entity

An Interface representing Gene. It contains all the gene related data (lucos id, probe name, etc...) that are retreived from MetNetDB

Author:

Mohammed Alabsi

Method Summary

boolean	equals(java.lang.Object obj)
java.lang.String	getAffy25kID()
java.lang.String	getAffy8kID()
java.lang.String	getAfgcID()
java.lang.String	getAracycPathway()
java.lang.String	getComment()
java.lang.String	getGeneName()
java.lang.String	getGoBiologicalProcess()
java.lang.String	getGoCellularComponent()
java.lang.String	getGoMolecularFunction()
java.lang.String	getLocusid()
java.lang.String	getMetnetLocation()
java.lang.String	getMetnetPathway()
java.lang.String	getPredictedLocation()
java.util.ArrayList<TairReference>	getReferenceList()
java.lang.String	getUniprotID()
void	setAffy25kID(java.lang.String affy25kID)
void	setAffy8kID(java.lang.String affy8kID)
void	setAfgcID(java.lang.String afgcID)
void	setAracycPathway(java.lang.String aracycPathway)
void	setComment(java.lang.String comment)
void	setGeneName(java.lang.String string)
void	setGoBiologicalProcess(java.lang.String goBiologicalProcess)
void	setGoCellularComponent(java.lang.String goCellularComponent)
void	setGoMolecularFunction(java.lang.String goMolecularFunction)
void	setLocusid(java.lang.String locusid)
void	setMetnetLocation(java.lang.String metnetLocation)
void	setMetnetPathway(java.lang.String metnetPathway)
void	setPredictedLocation(java.lang.String predictedLocation)
void	setReferenceList(java.util.ArrayList<TairReference> list)
void	setUniprotID(java.lang.String uniprotID)

Methods inherited from interface edu.iastate.metnet.datamodel.Entity

getAttr, getName, setAttr

Method Detail

setGeneName

void setGeneName(java.lang.String string)

getGeneName

java.lang.String getGeneName()

setPredictedLocation

void setPredictedLocation(java.lang.String predictedLocation)

setMetnetLocation

void setMetnetLocation(java.lang.String metnetLocation)

setLocusid

void setLocusid(java.lang.String locusid)

setUniprotID

void setUniprotID(java.lang.String uniprotID)

setGoCellularComponent

void setGoCellularComponent(java.lang.String goCellularComponent)

setGoMolecularFunction

void setGoMolecularFunction(java.lang.String goMolecularFunction)

setGoBiologicalProcess

void setGoBiologicalProcess(java.lang.String goBiologicalProcess)

setAracycPathway

void setAracycPathway(java.lang.String aracycPathway)

setMetnetPathway

void setMetnetPathway(java.lang.String metnetPathway)

setAffy8kID

void setAffy8kID(java.lang.String affy8kID)

setAffy25kID

void setAffy25kID(java.lang.String affy25kID)

setAfgcID

void setAfgcID(java.lang.String afgcID)

setComment

void setComment(java.lang.String comment)

setReferenceList

void setReferenceList(java.util.ArrayList<TairReference> list)

getReferenceList

java.util.ArrayList<TairReference> getReferenceList()

getAffy25kID

java.lang.String getAffy25kID()

getAffy8kID

java.lang.String getAffy8kID()

getAfgcID

java.lang.String getAfgcID()

getComment

java.lang.String getComment()

getGoBiologicalProcess

java.lang.String getGoBiologicalProcess()

getGoCellularComponent

java.lang.String getGoCellularComponent()

getGoMolecularFunction

java.lang.String getGoMolecularFunction()

getLocusid

java.lang.String getLocusid()

getMetnetLocation

java.lang.String getMetnetLocation()

getPredictedLocation

java.lang.String getPredictedLocation()

getUniprotID

java.lang.String getUniprotID()

getAracycPathway

java.lang.String getAracycPathway()

getMetnetPathway

java.lang.String getMetnetPathway()

equals

boolean equals(java.lang.Object obj)

Overrides:

equals in class java.lang.Object