edu.iastate.metnet.export
Class MetaboliteObjectImpl

java.lang.Object
  edu.iastate.metnet.export.MetaboliteObjectImpl

All Implemented Interfaces:

MetaboliteObject, java.io.Serializable

public class MetaboliteObjectImpl
extends java.lang.Object
implements java.io.Serializable, MetaboliteObject

See Also:

Serialized Form

Constructor Summary

MetaboliteObjectImpl(ChebiObject dao)

Method Summary

java.util.Collection	getCasList()
java.util.Collection	getCasListX()
java.lang.Integer	getChebiCid()
java.lang.String	getChebiDbAccession()
java.lang.String	getChebiFormula()
java.lang.String	getChebiInChI()
java.lang.String	getChebiName()
java.lang.String	getChebiSmiles()
java.util.Collection	getPubchemCidList()
java.util.Collection	getPubchemCidListX()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

MetaboliteObjectImpl

public MetaboliteObjectImpl(ChebiObject dao)

Method Detail

getCasList

public java.util.Collection getCasList()

Specified by:

getCasList in interface MetaboliteObject

Returns:

CAS inferred from metnetdb name and pubchem

getCasListX

public java.util.Collection getCasListX()

Specified by:

getCasListX in interface MetaboliteObject

Returns:

CAS inferred from metnetdb synonym and pubchem

getChebiCid

public java.lang.Integer getChebiCid()

Specified by:

getChebiCid in interface MetaboliteObject

Returns:

chebi compound id

getChebiDbAccession

public java.lang.String getChebiDbAccession()

Specified by:

getChebiDbAccession in interface MetaboliteObject

Returns:

db link

getChebiFormula

public java.lang.String getChebiFormula()

Specified by:

getChebiFormula in interface MetaboliteObject

Returns:

foruma from chebi

getChebiInChI

public java.lang.String getChebiInChI()

Specified by:

getChebiInChI in interface MetaboliteObject

Returns:

InChI from chebi

getChebiName

public java.lang.String getChebiName()

Specified by:

getChebiName in interface MetaboliteObject

Returns:

chebi name

getChebiSmiles

public java.lang.String getChebiSmiles()

Specified by:

getChebiSmiles in interface MetaboliteObject

Returns:

SMILE from chebi

getPubchemCidList

public java.util.Collection getPubchemCidList()

Specified by:

getPubchemCidList in interface MetaboliteObject

Returns:

pubchem cid inferred from metnetdb name and pubchem

getPubchemCidListX

public java.util.Collection getPubchemCidListX()

Specified by:

getPubchemCidListX in interface MetaboliteObject

Returns:

pubchem cid inferred from metnetdb synonym and pubchem