edu.iastate.metnet.hibernate
Class Entity

java.lang.Object
  edu.iastate.metnet.hibernate.AbstractEntity
      edu.iastate.metnet.hibernate.Entity

All Implemented Interfaces:

java.io.Serializable

public class Entity
extends AbstractEntity
implements java.io.Serializable

A class that represents a row in the 'entity' table. This class may be customized as it is never re-generated after being created.

See Also:

Serialized Form

Constructor Summary

Entity()
Simple constructor of Entity instances.

Entity(java.lang.Integer entityid)
Constructor of Entity instances given a simple primary key.

Method Summary

java.util.ArrayList	getAbbreviations() abbreviation
java.util.ArrayList	getEntityabbreviationSet()
java.util.ArrayList	getEntitycommentSet()
java.util.ArrayList	getEntityexternaldbSet()
java.util.ArrayList	getEntityOntologySet()
java.util.ArrayList	getEntityrefSet()
java.util.ArrayList	getEntitysynonymSet()
java.util.ArrayList	getSynonyms() get the synonym as distinct Vector
boolean	isGene()
boolean	isInChloroplast()
boolean	isInMitochondrion()
boolean	isMetabolite()
boolean	isPolypeptide()
boolean	isProtein()
boolean	isProteinComplex()
boolean	isRNA()
void	setEntityabbreviationSet(java.util.ArrayList entityabbreviationSet)
void	setEntitycommentSet(java.util.ArrayList entitycommentSet)
void	setEntityexternaldbSet(java.util.ArrayList entityexternaldbSet)
void	setEntityOntologySet(java.util.ArrayList entityOntologySet)
void	setEntityrefSet(java.util.ArrayList entityrefSet)
void	setEntitysynonymSet(java.util.ArrayList entitysynonymSet)

Methods inherited from class edu.iastate.metnet.hibernate.AbstractEntity

equals, getDate, getEntityid, getName, getOrganism, getSource, getType, getUsername, hashCode, setDate, setEntityid, setName, setOrganism, setSource, setType, setUsername

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Entity

public Entity()

Simple constructor of Entity instances.

Entity

public Entity(java.lang.Integer entityid)

Constructor of Entity instances given a simple primary key.

Parameters:

entityid -

Method Detail

getEntityexternaldbSet

public java.util.ArrayList getEntityexternaldbSet()

Returns:

Returns the entityexternaldbSet.

setEntityexternaldbSet

public void setEntityexternaldbSet(java.util.ArrayList entityexternaldbSet)

Parameters:

entityexternaldbSet - The entityexternaldbSet to set.

getEntityabbreviationSet

public java.util.ArrayList getEntityabbreviationSet()

Returns:

Returns the entityabbreviationSet.

getEntitycommentSet

public java.util.ArrayList getEntitycommentSet()

Returns:

Returns the entitycommentSet.

getEntityrefSet

public java.util.ArrayList getEntityrefSet()

Returns:

Returns the entityrefSet.

getEntitysynonymSet

public java.util.ArrayList getEntitysynonymSet()

Returns:

Returns the entitysynonymSet.

setEntityabbreviationSet

public void setEntityabbreviationSet(java.util.ArrayList entityabbreviationSet)

Parameters:

entityabbreviationSet - The entityabbreviationSet to set.

setEntitycommentSet

public void setEntitycommentSet(java.util.ArrayList entitycommentSet)

Parameters:

entitycommentSet - The entitycommentSet to set.

setEntityrefSet

public void setEntityrefSet(java.util.ArrayList entityrefSet)

Parameters:

entityrefSet - The entityrefSet to set.

setEntitysynonymSet

public void setEntitysynonymSet(java.util.ArrayList entitysynonymSet)

Parameters:

entitysynonymSet - The entitysynonymSet to set.

getAbbreviations

public java.util.ArrayList getAbbreviations()

abbreviation

Returns:

vector of abbreviation

getSynonyms

public java.util.ArrayList getSynonyms()

get the synonym as distinct Vector

Returns:

vector of synonyms

getEntityOntologySet

public java.util.ArrayList getEntityOntologySet()

Returns:

Returns the entityOntologySet.

setEntityOntologySet

public void setEntityOntologySet(java.util.ArrayList entityOntologySet)

Parameters:

entityOntologySet - The entityOntologySet to set.

isGene

public boolean isGene()

isRNA

public boolean isRNA()

isPolypeptide

public boolean isPolypeptide()

isProteinComplex

public boolean isProteinComplex()

isProtein

public boolean isProtein()

isMetabolite

public boolean isMetabolite()

isInChloroplast

public boolean isInChloroplast()

isInMitochondrion

public boolean isInMitochondrion()